Resultados completos de la Tesis Doctoral [autobombo]
A good time after finishing the thesis, I finally got a support for permanently storing the results of the thesis, by Ramón .
And it was not so simple because it requires space. Only results that are hung at the moment is 116 GB. And I have not uploaded the predictor variables (maps of topography and climate of Andalusia present and future at 100 m resolution) and the model results (another jug \u200b\u200bof gigs ...). Soon they will fall gradually. But for now, this is what it is: Here
general admission to the results. Where can download the pdf of the thesis and defense, and is accessible to the various digital attachments thesis. Here
directly to the simulations in Chapter 8. simulations are the change in the geographical distribution of 197 species of flora as climate change scenarios A2 and B2 in the 2000-2100 period at intervals of 10 years, with a spatial resolution of 100 meters. All the calculation is a coupled cellular automaton model of distribution. The best are the animations, in paragraph 3 of each tab. As a curiosity, the whole process took about 4000 hours of calculation (in 6 PCs and my dear DELL PRECISION 7500, that he alone was charged half the work).
In the right pane of the blog, under OTHER WORKS, is the direct link: Annex Thesis (html) .
And that's all for now!.
Monday, January 31, 2011
Sunday, January 30, 2011
How To Get A Dummy Phonr Working
Reuse plastic caps from bottles!
Superb idea, and not have to deal with ties, spring clips or seals. How
a bag and seal it tight?
Cut a disposable water bottle (or similar) and keep the neck and upper as in the photos below.
Insert the plastic bag through the mouth and screw the top to seal it.
The bottle is made to be airtight. . .
The secret is in the top and the threads of the bottle!
Great idea to share.
The secret is in the top and the threads of the bottle!
Great idea to share.
The secret is in the threaded neck and cap!
Great idea to share.
Bueno para nosotros y también para el medio ambiente.
Tuesday, January 18, 2011
Main Event Boxing Gloves 6 Oz
OBTENER NÚMERO DE LÍNEAS DE n FICHEROS [APUNTES]
When we make many models of distribution, an important detail is the number of available presence records for each species. Our goal is to get a table with the name and number of occurrences of each species. Assuming
files with records of presence does not have any headers, and are stored all in the same directory, these are the necessary commands: cd
directorio_presencias
for species in *; do
lines = `wc-l $ species
` echo $ species >> / path / fichero_salida.txt
done
fichero_salida.txt
The result, which has a format like this,
508 Adenocarpus_gibbsianus
7 Alchemilla_fontqueri
Allium_pruinatum
356 132 313 Anthemis_bourgaei
Antirrhinum_charidemi
1 Aquilegia_cazorlensis
in the name of each species is preceded by the number presence records.
When we make many models of distribution, an important detail is the number of available presence records for each species. Our goal is to get a table with the name and number of occurrences of each species. Assuming
files with records of presence does not have any headers, and are stored all in the same directory, these are the necessary commands: cd
directorio_presencias
for species in *; do
lines = `wc-l $ species
` echo $ species >> / path / fichero_salida.txt
done
fichero_salida.txt
The result, which has a format like this,
508 Adenocarpus_gibbsianus
7 Alchemilla_fontqueri
Allium_pruinatum
356 132 313 Anthemis_bourgaei
Antirrhinum_charidemi
1 Aquilegia_cazorlensis
in the name of each species is preceded by the number presence records.
Saturday, January 15, 2011
Tamarzipan How Long To Work
Thursday, January 13, 2011
Address Samples Departamento
CURSO DE MODELOS DE DISTRIBUCIÓN
The next May the Dr. David Nogués-Bravo and I teach a course on species distribution models entitled "New Frontiers in Species Distribution Models ( First Edition). "
All information relating to the course is available on the website of the Foundation General UGR- Company, and the triptych , but then I will summarize some details.
The course is taught at the Centro Andaluz Environment for 23 to May 27, 2011, from 09:00 to 14:00. There are 20 places available and the cost of tuition is 275 € (five scholarships of 100 € for members of the EALE ; available at info [at] aeet.org).
The content will follow this outline: Module 1
. THEORY AND WORKPLACE
I hope to see you there!
The next May the Dr. David Nogués-Bravo and I teach a course on species distribution models entitled "New Frontiers in Species Distribution Models ( First Edition). "
All information relating to the course is available on the website of the Foundation General UGR- Company, and the triptych , but then I will summarize some details.
The course is taught at the Centro Andaluz Environment for 23 to May 27, 2011, from 09:00 to 14:00. There are 20 places available and the cost of tuition is 275 € (five scholarships of 100 € for members of the EALE ; available at info [at] aeet.org).
The content will follow this outline: Module 1
. THEORY AND WORKPLACE
- theory, concepts and principles on species distribution models
- Work Environment Environmental variables
- presence Records
- Introduction to MaxEnt and Openmodeller
- with MaxEnt Model calibration and Open Modeller: calibration, multi-calibration, consensus forecasts and probabilistic models
- Assessment: Assessments "pseudo-independent" independent
- population mapping and location unknown future impacts
- climate change on biodiversity
- past climate change impacts on biodiversity
- Quaternary distribution models and food webs
I hope to see you there!
Wednesday, January 12, 2011
What Is Considered Low Basal
THE HUMAN FOOTPRINT AND THE LAST OF THE WILD (y dos)
previous post in well above told how to map the human footprint on the territory by reference to Sanderson et al. (2002) and Woolmer et al. (2008). Generate human footprint map of Andalusia seemed an interesting exercise for our students to practice their skills Ecoinformatics with GRASS (and pass the assessment will be played ...). In this post I will address the GRASSienta the year. All material can be downloaded from here (113MB).
The file you're downloading contains:
The GRASS mapset called dirgrass , and contains a town called andalucia_geo2 . In this locality, including the Andalusian region, two mapsets; PERMANENT , where layers of departure, and huella_humana , where we work. Copy dirgrass in your home directory.
The PERMANENT mapset several raster layers, but only use cob_corine (land use Corine Land Cover) and pob_2000 (population density in 2000). We also have a lot of vector layers that represent different infrastructures, all with the prefix infr_ . Start
GRASS mapset in huella_humana .
workflow
The work schedule is summarized in the following image (click to enlarge, in the compressed file is in HD).
The script The script contains all the steps necessary to generate the human footprint map is hu.grass . Copy it to your personal folder.
The first time you run it step by step copying each line in the GRASS terminal to scroll through each result, in order to understand the process. Later, when changes occur to you to do in the script to generate a footprint map according to your criteria, you can run it directly by typing this in the GRASS terminal: bash
hu.grass
The result
final
The end result should look like this (more or less according to the variations that add to the script), if you use the map to add the fingerprint of the different topics,
or like this if you like the most footprint per cell of all issues.
There are many possible variations within the same methodology, in buffer sizes, and weights of the footprint of each particular layer, and even the ability to weigh the final sum. Choose yours, but justify it ...
That's it!
previous post in well above told how to map the human footprint on the territory by reference to Sanderson et al. (2002) and Woolmer et al. (2008). Generate human footprint map of Andalusia seemed an interesting exercise for our students to practice their skills Ecoinformatics with GRASS (and pass the assessment will be played ...). In this post I will address the GRASSienta the year. All material can be downloaded from here (113MB).
The file you're downloading contains:
- dirgrass: GRASS working directory with all the necessary layers
- papers: Articles of Sanderson and Woolmer
- hu.grass: GRASS script to generate the fingerprint map HUELLA_HUMANA.jpg and human
- . svg: pattern of workflow necessary to generate the map
- HUELLA_HUMANA_MAXIMUM and SUM. Jpg: high resolution capture of trace maps resulting
The GRASS mapset called dirgrass , and contains a town called andalucia_geo2 . In this locality, including the Andalusian region, two mapsets; PERMANENT , where layers of departure, and huella_humana , where we work. Copy dirgrass in your home directory.
The PERMANENT mapset several raster layers, but only use cob_corine (land use Corine Land Cover) and pob_2000 (population density in 2000). We also have a lot of vector layers that represent different infrastructures, all with the prefix infr_ . Start
GRASS mapset in huella_humana .
workflow
The work schedule is summarized in the following image (click to enlarge, in the compressed file is in HD).
The script The script contains all the steps necessary to generate the human footprint map is hu.grass . Copy it to your personal folder.
The first time you run it step by step copying each line in the GRASS terminal to scroll through each result, in order to understand the process. Later, when changes occur to you to do in the script to generate a footprint map according to your criteria, you can run it directly by typing this in the GRASS terminal: bash
hu.grass
The result
final
The end result should look like this (more or less according to the variations that add to the script), if you use the map to add the fingerprint of the different topics,
or like this if you like the most footprint per cell of all issues.
There are many possible variations within the same methodology, in buffer sizes, and weights of the footprint of each particular layer, and even the ability to weigh the final sum. Choose yours, but justify it ...
That's it!
Sunday, January 9, 2011
Orion 10x70 Binocular
THE HUMAN FOOTPRINT AND THE LAST OF THE WILD
Thus begins (and not a precedent the Biblical quotation) article entitled "The Human Footprint and the Last of the Wild" ( Sanderson et al. 2002). According to this post (I'd like to see the faces of the referees) good (and bad news) is that we have been successful, very successful, taking us home to Earth. Every house, every culture, every road, every "thing" to build or play is a part of the human footprint on the planet. But not all those "things" have the same intensity. That intensity can be measured as an area of \u200b\u200binfluence (noise impact distance of a motorway) as a degree of reversibility (ability to regenerate the natural habitat terminated the life of the "thing"), or as a degree of naturalization (not is the same as a wood stocked a natural forest).
Following this idea, the authors of this article worldwide have mapped the human footprint on the territory , as shown in the following image (black and red = high value trace; oranges and yellow = lowest value of trace).
is a simple but powerful concept, designed to measure the degree of human impact in the territory with a single map, and also to calculate operations are simple, but require a lot of information, it is sometimes difficult to achieve. Sanderson
et al. four types of data used to generate this map: population density, type of land use, accessibility and energy infrastructure.
to population density, these authors assume that the human footprint increases linearly from 0 to 9 to 10 persons/km2, and from there any value equals 10.
land uses fingerprint value 10 are human constructions of any kind. The values \u200b\u200b8, 7 and 6 are reserved for different types of crops, while lower values \u200b\u200bare assigned to mixed use little anthropogenic.
To measure the accessibility of the territory generate buffers at different distances on roads, rivers, coastlines, giving low values \u200b\u200bof trace to these areas of influence.
As an indicator of energy infrastructure using visible lights at night from satellite images, assigning values \u200b\u200bfootprint as the percentage of days per year that remain lit in different regions. Finally add
different factors for human footprint index.
lowest values \u200b\u200bin this map are "the last of the wild", or areas less influenced by man.
The main applications of this map revolve around the selection of reserves according to the human footprint. Where the human footprint is low, it may raise more ambitious conservation goals in those places with high mark.
A fundamental problem of this map is the relevance of the data. All baseline information comes from large data sets that take several years to be drawn up, so that errors may occur local consideration. Another problem is the scale (1 km), slightly more coarse than that used for the design of conservation plans.
Another highly recommended article on the same topic is "rescaling the Human Footprint: A tool for conservation planning at an ecoregional scale" ( Woolmer et al. 2008), which is improved by increasing human footprint map resolution (90 m). The change of decision involves the use of better data, and some changes in methodology. For my taste, this second article is more complete in terms of methodology.
And this is the go scour in which my students now master, creating a human footprint map of Andalusia. I will tell you the result of student work, and I will provide the data and code necessary to calculate GRASS yourselves.
That's all!
PS: Thanks to my mate Ricardo Moreno iEcolab Llorca for introducing me to this interesting topic.
Thus begins (and not a precedent the Biblical quotation) article entitled "The Human Footprint and the Last of the Wild" ( Sanderson et al. 2002). According to this post (I'd like to see the faces of the referees) good (and bad news) is that we have been successful, very successful, taking us home to Earth. Every house, every culture, every road, every "thing" to build or play is a part of the human footprint on the planet. But not all those "things" have the same intensity. That intensity can be measured as an area of \u200b\u200binfluence (noise impact distance of a motorway) as a degree of reversibility (ability to regenerate the natural habitat terminated the life of the "thing"), or as a degree of naturalization (not is the same as a wood stocked a natural forest).
Following this idea, the authors of this article worldwide have mapped the human footprint on the territory , as shown in the following image (black and red = high value trace; oranges and yellow = lowest value of trace).
is a simple but powerful concept, designed to measure the degree of human impact in the territory with a single map, and also to calculate operations are simple, but require a lot of information, it is sometimes difficult to achieve. Sanderson
et al. four types of data used to generate this map: population density, type of land use, accessibility and energy infrastructure.
to population density, these authors assume that the human footprint increases linearly from 0 to 9 to 10 persons/km2, and from there any value equals 10.
land uses fingerprint value 10 are human constructions of any kind. The values \u200b\u200b8, 7 and 6 are reserved for different types of crops, while lower values \u200b\u200bare assigned to mixed use little anthropogenic.
To measure the accessibility of the territory generate buffers at different distances on roads, rivers, coastlines, giving low values \u200b\u200bof trace to these areas of influence.
As an indicator of energy infrastructure using visible lights at night from satellite images, assigning values \u200b\u200bfootprint as the percentage of days per year that remain lit in different regions. Finally add
different factors for human footprint index.
lowest values \u200b\u200bin this map are "the last of the wild", or areas less influenced by man.
The main applications of this map revolve around the selection of reserves according to the human footprint. Where the human footprint is low, it may raise more ambitious conservation goals in those places with high mark.
A fundamental problem of this map is the relevance of the data. All baseline information comes from large data sets that take several years to be drawn up, so that errors may occur local consideration. Another problem is the scale (1 km), slightly more coarse than that used for the design of conservation plans.
Another highly recommended article on the same topic is "rescaling the Human Footprint: A tool for conservation planning at an ecoregional scale" ( Woolmer et al. 2008), which is improved by increasing human footprint map resolution (90 m). The change of decision involves the use of better data, and some changes in methodology. For my taste, this second article is more complete in terms of methodology.
And this is the go scour in which my students now master, creating a human footprint map of Andalusia. I will tell you the result of student work, and I will provide the data and code necessary to calculate GRASS yourselves.
That's all!
PS: Thanks to my mate Ricardo Moreno iEcolab Llorca for introducing me to this interesting topic.
Subscribe to:
Posts (Atom)